Ravindranath PA, Forli S, Goodsell DS, Olson AJ, Sanner MF (2015). AutoDockFR: Advances in Protein-Ligand Docking with Explicitly Specified Binding Site Flexibility. PLoS Comput. Biol. 11(12): e1004586. doi:10.1371/journal.pcbi.1004586

Ravindranath PA and Sanner MF. AutoSite: an automated approach for pseudo-ligands prediction - From ligand binding sites identification to predicting key ligand atoms. (submitted)

Ravindranath PA and Tidor B. Robust Inhibition of Hepatitis C Viral Propagation. Thesis - Doctor of Philosophy (2013). Singapore-MIT Alliance (NUS).